Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc5a7Q8BGY9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc5a7Q8BGY9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.17■□□□□ 0.5
Slc5a7Q8BGY9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc5a7Q8BGY9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc5a7Q8BGY9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.14■□□□□ 0.5
Slc5a7Q8BGY9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc5a7Q8BGY9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Slc5a7Q8BGY9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc5a7Q8BGY9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc5a7Q8BGY9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms