Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubfd1Q78JW9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ubfd1Q78JW9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubfd1Q78JW9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.31■□□□□ 0.84
Ubfd1Q78JW9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.31■□□□□ 0.84
Ubfd1Q78JW9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubfd1Q78JW9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubfd1Q78JW9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ubfd1Q78JW9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubfd1Q78JW9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.28■□□□□ 0.84
Ubfd1Q78JW9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubfd1Q78JW9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubfd1Q78JW9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubfd1Q78JW9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubfd1Q78JW9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.27■□□□□ 0.84
Ubfd1Q78JW9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubfd1Q78JW9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubfd1Q78JW9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubfd1Q78JW9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubfd1Q78JW9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Gm12821-201ENSMUST00000120022 600 ntBASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubfd1Q78JW9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.25■□□□□ 0.83
Ubfd1Q78JW9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubfd1Q78JW9 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.25■□□□□ 0.83
Ubfd1Q78JW9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.25■□□□□ 0.83
Ubfd1Q78JW9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubfd1Q78JW9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubfd1Q78JW9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ubfd1Q78JW9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ubfd1Q78JW9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubfd1Q78JW9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubfd1Q78JW9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubfd1Q78JW9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubfd1Q78JW9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubfd1Q78JW9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.22■□□□□ 0.83
Ubfd1Q78JW9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubfd1Q78JW9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubfd1Q78JW9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubfd1Q78JW9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.2■□□□□ 0.82
Ubfd1Q78JW9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.19■□□□□ 0.82
Ubfd1Q78JW9 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.19■□□□□ 0.82
Ubfd1Q78JW9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms