Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Trim27Q62158 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim27Q62158 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Trim27Q62158 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim27Q62158 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.7■■□□□ 1.7
Trim27Q62158 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim27Q62158 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.69■■□□□ 1.7
Trim27Q62158 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Trim27Q62158 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim27Q62158 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Trim27Q62158 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim27Q62158 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.69■■□□□ 1.7
Trim27Q62158 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.69■■□□□ 1.7
Trim27Q62158 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Trim27Q62158 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim27Q62158 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim27Q62158 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim27Q62158 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Trim27Q62158 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
Trim27Q62158 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Gm5812-201ENSMUST00000061073 957 ntBASIC25.68■■□□□ 1.7
Trim27Q62158 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim27Q62158 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim27Q62158 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
Trim27Q62158 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim27Q62158 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.66■■□□□ 1.7
Trim27Q62158 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Trim27Q62158 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trim27Q62158 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.65■■□□□ 1.7
Trim27Q62158 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim27Q62158 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Trim27Q62158 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.65■■□□□ 1.7
Trim27Q62158 Gm10399-202ENSMUST00000202768 748 ntBASIC25.65■■□□□ 1.7
Trim27Q62158 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim27Q62158 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim27Q62158 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim27Q62158 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.64■■□□□ 1.7
Trim27Q62158 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim27Q62158 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.64■■□□□ 1.7
Trim27Q62158 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim27Q62158 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim27Q62158 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Trim27Q62158 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.64■■□□□ 1.7
Trim27Q62158 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trim27Q62158 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim27Q62158 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim27Q62158 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim27Q62158 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Trim27Q62158 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim27Q62158 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Trim27Q62158 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trim27Q62158 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim27Q62158 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.62■■□□□ 1.69
Trim27Q62158 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.62■■□□□ 1.69
Trim27Q62158 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Trim27Q62158 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Trim27Q62158 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Trim27Q62158 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim27Q62158 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Trim27Q62158 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Trim27Q62158 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim27Q62158 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim27Q62158 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC25.6■■□□□ 1.69
Trim27Q62158 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Trim27Q62158 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim27Q62158 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim27Q62158 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim27Q62158 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Trim27Q62158 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.6■■□□□ 1.69
Trim27Q62158 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim27Q62158 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim27Q62158 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim27Q62158 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim27Q62158 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim27Q62158 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim27Q62158 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim27Q62158 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim27Q62158 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim27Q62158 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim27Q62158 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.58■■□□□ 1.69
Trim27Q62158 Gm43006-201ENSMUST00000197702 1602 ntBASIC25.58■■□□□ 1.69
Trim27Q62158 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim27Q62158 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.57■■□□□ 1.68
Trim27Q62158 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim27Q62158 Gm15820-201ENSMUST00000201566 728 ntBASIC25.57■■□□□ 1.68
Trim27Q62158 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim27Q62158 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.56■■□□□ 1.68
Trim27Q62158 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Trim27Q62158 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.56■■□□□ 1.68
Trim27Q62158 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim27Q62158 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim27Q62158 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC25.55■■□□□ 1.68
Trim27Q62158 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.55■■□□□ 1.68
Trim27Q62158 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.55■■□□□ 1.68
Trim27Q62158 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms