Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
ThraP63058 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.91■□□□□ 0.94
ThraP63058 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ThraP63058 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ThraP63058 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ThraP63058 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.9■□□□□ 0.94
ThraP63058 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.9■□□□□ 0.94
ThraP63058 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.9■□□□□ 0.94
ThraP63058 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.9■□□□□ 0.94
ThraP63058 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ThraP63058 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ThraP63058 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
ThraP63058 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ThraP63058 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ThraP63058 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.89■□□□□ 0.93
ThraP63058 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.89■□□□□ 0.93
ThraP63058 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ThraP63058 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ThraP63058 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.88■□□□□ 0.93
ThraP63058 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ThraP63058 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
ThraP63058 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ThraP63058 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ThraP63058 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.87■□□□□ 0.93
ThraP63058 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ThraP63058 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ThraP63058 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ThraP63058 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ThraP63058 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.87■□□□□ 0.93
ThraP63058 Gm7417-201ENSMUST00000192950 473 ntBASIC20.87■□□□□ 0.93
ThraP63058 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.87■□□□□ 0.93
ThraP63058 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.87■□□□□ 0.93
ThraP63058 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ThraP63058 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ThraP63058 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
ThraP63058 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ThraP63058 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ThraP63058 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.86■□□□□ 0.93
ThraP63058 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ThraP63058 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.86■□□□□ 0.93
ThraP63058 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ThraP63058 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.86■□□□□ 0.93
ThraP63058 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ThraP63058 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ThraP63058 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.86■□□□□ 0.93
ThraP63058 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ThraP63058 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ThraP63058 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.85■□□□□ 0.93
ThraP63058 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.85■□□□□ 0.93
ThraP63058 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ThraP63058 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ThraP63058 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ThraP63058 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ThraP63058 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ThraP63058 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ThraP63058 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.84■□□□□ 0.93
ThraP63058 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ThraP63058 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ThraP63058 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.84■□□□□ 0.93
ThraP63058 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.84■□□□□ 0.93
ThraP63058 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ThraP63058 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
ThraP63058 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ThraP63058 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ThraP63058 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ThraP63058 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ThraP63058 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ThraP63058 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.83■□□□□ 0.93
ThraP63058 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ThraP63058 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ThraP63058 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ThraP63058 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ThraP63058 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ThraP63058 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ThraP63058 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ThraP63058 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ThraP63058 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms