Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ybx1P62960 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ybx1P62960 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ybx1P62960 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ybx1P62960 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.45■■□□□ 1.02
Ybx1P62960 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Ybx1P62960 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ybx1P62960 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ybx1P62960 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ybx1P62960 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ybx1P62960 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ybx1P62960 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ybx1P62960 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ybx1P62960 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ybx1P62960 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.44■■□□□ 1.02
Ybx1P62960 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ybx1P62960 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ybx1P62960 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ybx1P62960 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ybx1P62960 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ybx1P62960 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ybx1P62960 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.42■■□□□ 1.02
Ybx1P62960 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.42■■□□□ 1.02
Ybx1P62960 Gm6139-201ENSMUST00000079261 882 ntBASIC21.42■■□□□ 1.02
Ybx1P62960 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ybx1P62960 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ybx1P62960 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ybx1P62960 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Ybx1P62960 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ybx1P62960 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ybx1P62960 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ybx1P62960 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ybx1P62960 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Ybx1P62960 Gm43137-201ENSMUST00000198052 594 ntBASIC21.4■■□□□ 1.02
Ybx1P62960 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ybx1P62960 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ybx1P62960 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ybx1P62960 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ybx1P62960 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ybx1P62960 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.39■■□□□ 1.01
Ybx1P62960 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ybx1P62960 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ybx1P62960 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ybx1P62960 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ybx1P62960 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ybx1P62960 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.38■■□□□ 1.01
Ybx1P62960 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.38■■□□□ 1.01
Ybx1P62960 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.38■■□□□ 1.01
Ybx1P62960 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ybx1P62960 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ybx1P62960 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ybx1P62960 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ybx1P62960 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ybx1P62960 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ybx1P62960 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ybx1P62960 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ybx1P62960 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.37■■□□□ 1.01
Ybx1P62960 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.37■■□□□ 1.01
Ybx1P62960 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.37■■□□□ 1.01
Ybx1P62960 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.37■■□□□ 1.01
Ybx1P62960 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ybx1P62960 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.36■■□□□ 1.01
Ybx1P62960 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.36■■□□□ 1.01
Ybx1P62960 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ybx1P62960 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ybx1P62960 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ybx1P62960 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ybx1P62960 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ybx1P62960 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ybx1P62960 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Ybx1P62960 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ybx1P62960 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
Ybx1P62960 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ybx1P62960 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.35■■□□□ 1.01
Ybx1P62960 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ybx1P62960 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ybx1P62960 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ybx1P62960 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
Ybx1P62960 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ybx1P62960 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ybx1P62960 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.34■■□□□ 1.01
Ybx1P62960 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ybx1P62960 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms