Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.8■■□□□ 1.88
Msh6P54276 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.8■■□□□ 1.88
Msh6P54276 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Msh6P54276 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Msh6P54276 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC26.8■■□□□ 1.88
Msh6P54276 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.79■■□□□ 1.88
Msh6P54276 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Msh6P54276 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Msh6P54276 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Msh6P54276 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC26.78■■□□□ 1.88
Msh6P54276 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Msh6P54276 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Msh6P54276 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.77■■□□□ 1.88
Msh6P54276 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Msh6P54276 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.76■■□□□ 1.87
Msh6P54276 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Msh6P54276 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Msh6P54276 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
Msh6P54276 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC26.75■■□□□ 1.87
Msh6P54276 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Msh6P54276 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Msh6P54276 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Msh6P54276 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Msh6P54276 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Msh6P54276 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
Msh6P54276 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC26.74■■□□□ 1.87
Msh6P54276 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.74■■□□□ 1.87
Msh6P54276 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Msh6P54276 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.74■■□□□ 1.87
Msh6P54276 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Msh6P54276 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Msh6P54276 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
Msh6P54276 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Msh6P54276 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Msh6P54276 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Msh6P54276 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Msh6P54276 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Msh6P54276 Gm9870-201ENSMUST00000063874 645 ntBASIC26.72■■□□□ 1.87
Msh6P54276 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Msh6P54276 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC26.72■■□□□ 1.87
Msh6P54276 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Msh6P54276 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Msh6P54276 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Msh6P54276 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Msh6P54276 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.71■■□□□ 1.87
Msh6P54276 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Msh6P54276 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Msh6P54276 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Msh6P54276 Gm21168-201ENSMUST00000199646 1096 ntBASIC26.71■■□□□ 1.87
Msh6P54276 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
Msh6P54276 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Msh6P54276 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Msh6P54276 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
Msh6P54276 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Msh6P54276 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Msh6P54276 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Msh6P54276 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Msh6P54276 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Msh6P54276 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Msh6P54276 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Msh6P54276 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Msh6P54276 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.68■■□□□ 1.86
Msh6P54276 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Msh6P54276 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Msh6P54276 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Msh6P54276 Gm43137-201ENSMUST00000198052 594 ntBASIC26.67■■□□□ 1.86
Msh6P54276 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Msh6P54276 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Msh6P54276 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Msh6P54276 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
Msh6P54276 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Msh6P54276 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Msh6P54276 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Msh6P54276 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Msh6P54276 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.65■■□□□ 1.86
Msh6P54276 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC26.65■■□□□ 1.86
Msh6P54276 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Msh6P54276 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Msh6P54276 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Msh6P54276 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Msh6P54276 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Msh6P54276 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms