Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf9P41274 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf9P41274 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tnfsf9P41274 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
Tnfsf9P41274 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tnfsf9P41274 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf9P41274 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf9P41274 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf9P41274 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tnfsf9P41274 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
Tnfsf9P41274 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf9P41274 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf9P41274 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.86■□□□□ 0.77
Tnfsf9P41274 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfsf9P41274 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf9P41274 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.85■□□□□ 0.77
Tnfsf9P41274 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfsf9P41274 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.84■□□□□ 0.77
Tnfsf9P41274 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.84■□□□□ 0.77
Tnfsf9P41274 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.84■□□□□ 0.77
Tnfsf9P41274 Golgb1-201ENSMUST00000023534 498 ntBASIC19.84■□□□□ 0.77
Tnfsf9P41274 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf9P41274 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfsf9P41274 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfsf9P41274 Gm21956-201ENSMUST00000179946 522 ntBASIC19.83■□□□□ 0.77
Tnfsf9P41274 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Tnfsf9P41274 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfsf9P41274 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Gm9870-201ENSMUST00000063874 645 ntBASIC19.82■□□□□ 0.76
Tnfsf9P41274 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.82■□□□□ 0.76
Tnfsf9P41274 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf9P41274 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfsf9P41274 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Tnfsf9P41274 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.81■□□□□ 0.76
Tnfsf9P41274 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.81■□□□□ 0.76
Tnfsf9P41274 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Tnfsf9P41274 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Tnfsf9P41274 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.8■□□□□ 0.76
Tnfsf9P41274 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfsf9P41274 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfsf9P41274 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Tnfsf9P41274 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfsf9P41274 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfsf9P41274 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tnfsf9P41274 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.79■□□□□ 0.76
Tnfsf9P41274 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf9P41274 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfsf9P41274 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfsf9P41274 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms