Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cd9P40240 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd9P40240 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cd9P40240 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd9P40240 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cd9P40240 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd9P40240 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.65■□□□□ 0.9
Cd9P40240 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd9P40240 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.65■□□□□ 0.9
Cd9P40240 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd9P40240 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd9P40240 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cd9P40240 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.65■□□□□ 0.9
Cd9P40240 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd9P40240 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.64■□□□□ 0.9
Cd9P40240 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd9P40240 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cd9P40240 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.64■□□□□ 0.89
Cd9P40240 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd9P40240 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.63■□□□□ 0.89
Cd9P40240 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.63■□□□□ 0.89
Cd9P40240 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cd9P40240 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd9P40240 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd9P40240 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.63■□□□□ 0.89
Cd9P40240 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd9P40240 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cd9P40240 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd9P40240 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cd9P40240 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd9P40240 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cd9P40240 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd9P40240 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd9P40240 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cd9P40240 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.61■□□□□ 0.89
Cd9P40240 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.61■□□□□ 0.89
Cd9P40240 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cd9P40240 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd9P40240 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd9P40240 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd9P40240 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.6■□□□□ 0.89
Cd9P40240 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd9P40240 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd9P40240 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd9P40240 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cd9P40240 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd9P40240 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd9P40240 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.58■□□□□ 0.89
Cd9P40240 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.58■□□□□ 0.89
Cd9P40240 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.58■□□□□ 0.89
Cd9P40240 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd9P40240 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd9P40240 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cd9P40240 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd9P40240 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cd9P40240 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.57■□□□□ 0.88
Cd9P40240 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd9P40240 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd9P40240 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cd9P40240 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd9P40240 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd9P40240 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd9P40240 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Cd9P40240 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd9P40240 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.56■□□□□ 0.88
Cd9P40240 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
Cd9P40240 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cd9P40240 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.56■□□□□ 0.88
Cd9P40240 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd9P40240 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd9P40240 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd9P40240 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cd9P40240 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd9P40240 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cd9P40240 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Cd9P40240 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd9P40240 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd9P40240 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd9P40240 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd9P40240 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.53■□□□□ 0.88
Cd9P40240 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.53■□□□□ 0.88
Cd9P40240 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd9P40240 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd9P40240 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd9P40240 Gm40881-201ENSMUST00000223397 166 ntBASIC20.52■□□□□ 0.88
Cd9P40240 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd9P40240 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd9P40240 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd9P40240 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.52■□□□□ 0.88
Cd9P40240 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd9P40240 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cd9P40240 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Cd9P40240 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.51■□□□□ 0.87
Cd9P40240 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms