Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc6a1P31648 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.77■□□□□ 0.44
Slc6a1P31648 Scarna2-201ENSMUST00000157560 414 ntBASIC17.77■□□□□ 0.44
Slc6a1P31648 Gm45364-201ENSMUST00000210883 159 ntBASIC17.77■□□□□ 0.44
Slc6a1P31648 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a1P31648 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a1P31648 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a1P31648 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a1P31648 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a1P31648 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.76■□□□□ 0.43
Slc6a1P31648 Gm9812-201ENSMUST00000061934 968 ntBASIC17.76■□□□□ 0.43
Slc6a1P31648 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a1P31648 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc6a1P31648 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.75■□□□□ 0.43
Slc6a1P31648 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a1P31648 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a1P31648 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a1P31648 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc6a1P31648 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Slc6a1P31648 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc6a1P31648 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a1P31648 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Slc6a1P31648 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a1P31648 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a1P31648 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc6a1P31648 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc6a1P31648 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc6a1P31648 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc6a1P31648 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc6a1P31648 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.72■□□□□ 0.43
Slc6a1P31648 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc6a1P31648 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc6a1P31648 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc6a1P31648 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc6a1P31648 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a1P31648 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a1P31648 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc6a1P31648 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a1P31648 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc6a1P31648 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.71■□□□□ 0.43
Slc6a1P31648 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.71■□□□□ 0.43
Slc6a1P31648 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a1P31648 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc6a1P31648 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc6a1P31648 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc6a1P31648 Cap2-205ENSMUST00000225824 1634 ntBASIC17.7■□□□□ 0.42
Slc6a1P31648 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a1P31648 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Slc6a1P31648 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slc6a1P31648 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a1P31648 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a1P31648 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a1P31648 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a1P31648 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a1P31648 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a1P31648 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a1P31648 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc6a1P31648 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a1P31648 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Slc6a1P31648 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms