Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nfkb1P25799 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nfkb1P25799 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nfkb1P25799 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nfkb1P25799 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nfkb1P25799 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nfkb1P25799 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.38■■□□□ 1.01
Nfkb1P25799 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nfkb1P25799 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.38■■□□□ 1.01
Nfkb1P25799 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nfkb1P25799 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nfkb1P25799 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nfkb1P25799 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.37■■□□□ 1.01
Nfkb1P25799 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.37■■□□□ 1.01
Nfkb1P25799 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nfkb1P25799 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Nfkb1P25799 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nfkb1P25799 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Nfkb1P25799 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.36■■□□□ 1.01
Nfkb1P25799 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nfkb1P25799 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Nfkb1P25799 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nfkb1P25799 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nfkb1P25799 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nfkb1P25799 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nfkb1P25799 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Nfkb1P25799 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nfkb1P25799 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.34■■□□□ 1.01
Nfkb1P25799 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.34■■□□□ 1.01
Nfkb1P25799 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nfkb1P25799 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.33■■□□□ 1.01
Nfkb1P25799 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.33■■□□□ 1.01
Nfkb1P25799 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.33■■□□□ 1.01
Nfkb1P25799 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nfkb1P25799 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.33■■□□□ 1
Nfkb1P25799 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Nfkb1P25799 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nfkb1P25799 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nfkb1P25799 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nfkb1P25799 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Nfkb1P25799 Gm9870-201ENSMUST00000063874 645 ntBASIC21.32■■□□□ 1
Nfkb1P25799 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.32■■□□□ 1
Nfkb1P25799 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nfkb1P25799 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nfkb1P25799 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Nfkb1P25799 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nfkb1P25799 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nfkb1P25799 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.3■■□□□ 1
Nfkb1P25799 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nfkb1P25799 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nfkb1P25799 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nfkb1P25799 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nfkb1P25799 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.29■■□□□ 1
Nfkb1P25799 Gm12821-201ENSMUST00000120022 600 ntBASIC21.29■■□□□ 1
Nfkb1P25799 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Nfkb1P25799 Gm27454-201ENSMUST00000185090 204 ntBASIC21.29■■□□□ 1
Nfkb1P25799 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nfkb1P25799 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.29■■□□□ 1
Nfkb1P25799 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nfkb1P25799 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Nfkb1P25799 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.28■■□□□ 1
Nfkb1P25799 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.28■■□□□ 1
Nfkb1P25799 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Nfkb1P25799 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nfkb1P25799 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Nfkb1P25799 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nfkb1P25799 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nfkb1P25799 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.27■■□□□ 1
Nfkb1P25799 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Nfkb1P25799 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nfkb1P25799 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Nfkb1P25799 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms