Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pde6bP23440 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
Pde6bP23440 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pde6bP23440 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pde6bP23440 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.57■■□□□ 1.2
Pde6bP23440 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Pde6bP23440 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
Pde6bP23440 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.57■■□□□ 1.2
Pde6bP23440 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pde6bP23440 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.56■■□□□ 1.2
Pde6bP23440 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pde6bP23440 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Pde6bP23440 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pde6bP23440 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pde6bP23440 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pde6bP23440 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pde6bP23440 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.56■■□□□ 1.2
Pde6bP23440 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pde6bP23440 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pde6bP23440 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pde6bP23440 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pde6bP23440 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Pde6bP23440 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pde6bP23440 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.55■■□□□ 1.2
Pde6bP23440 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pde6bP23440 Gm9870-201ENSMUST00000063874 645 ntBASIC22.54■■□□□ 1.2
Pde6bP23440 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pde6bP23440 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pde6bP23440 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pde6bP23440 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Pde6bP23440 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.53■■□□□ 1.2
Pde6bP23440 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Pde6bP23440 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pde6bP23440 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pde6bP23440 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pde6bP23440 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Pde6bP23440 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pde6bP23440 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.52■■□□□ 1.2
Pde6bP23440 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pde6bP23440 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Pde6bP23440 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pde6bP23440 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pde6bP23440 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Pde6bP23440 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Pde6bP23440 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Pde6bP23440 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pde6bP23440 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pde6bP23440 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pde6bP23440 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pde6bP23440 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pde6bP23440 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pde6bP23440 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pde6bP23440 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pde6bP23440 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.49■■□□□ 1.19
Pde6bP23440 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.49■■□□□ 1.19
Pde6bP23440 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Pde6bP23440 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pde6bP23440 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pde6bP23440 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pde6bP23440 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pde6bP23440 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pde6bP23440 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.48■■□□□ 1.19
Pde6bP23440 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Pde6bP23440 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.47■■□□□ 1.19
Pde6bP23440 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.47■■□□□ 1.19
Pde6bP23440 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pde6bP23440 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Pde6bP23440 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pde6bP23440 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pde6bP23440 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Pde6bP23440 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.46■■□□□ 1.19
Pde6bP23440 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pde6bP23440 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Pde6bP23440 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Pde6bP23440 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pde6bP23440 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Pde6bP23440 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pde6bP23440 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
Pde6bP23440 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pde6bP23440 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms