Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd3B1AR17 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd3B1AR17 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.53■□□□□ 0.88
Chd3B1AR17 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd3B1AR17 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd3B1AR17 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.52■□□□□ 0.88
Chd3B1AR17 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd3B1AR17 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd3B1AR17 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.52■□□□□ 0.87
Chd3B1AR17 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chd3B1AR17 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd3B1AR17 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd3B1AR17 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd3B1AR17 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd3B1AR17 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Chd3B1AR17 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.5■□□□□ 0.87
Chd3B1AR17 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd3B1AR17 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd3B1AR17 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd3B1AR17 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chd3B1AR17 Gm27454-201ENSMUST00000185090 204 ntBASIC20.5■□□□□ 0.87
Chd3B1AR17 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.5■□□□□ 0.87
Chd3B1AR17 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.5■□□□□ 0.87
Chd3B1AR17 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
Chd3B1AR17 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chd3B1AR17 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Chd3B1AR17 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chd3B1AR17 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd3B1AR17 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd3B1AR17 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd3B1AR17 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.49■□□□□ 0.87
Chd3B1AR17 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd3B1AR17 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd3B1AR17 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Chd3B1AR17 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd3B1AR17 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.47■□□□□ 0.87
Chd3B1AR17 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd3B1AR17 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd3B1AR17 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd3B1AR17 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd3B1AR17 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd3B1AR17 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd3B1AR17 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.47■□□□□ 0.87
Chd3B1AR17 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd3B1AR17 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd3B1AR17 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd3B1AR17 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.46■□□□□ 0.87
Chd3B1AR17 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Chd3B1AR17 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd3B1AR17 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd3B1AR17 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd3B1AR17 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.46■□□□□ 0.87
Chd3B1AR17 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Chd3B1AR17 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chd3B1AR17 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd3B1AR17 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chd3B1AR17 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd3B1AR17 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd3B1AR17 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd3B1AR17 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd3B1AR17 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chd3B1AR17 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.43■□□□□ 0.86
Chd3B1AR17 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.43■□□□□ 0.86
Chd3B1AR17 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd3B1AR17 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Chd3B1AR17 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.42■□□□□ 0.86
Chd3B1AR17 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.42■□□□□ 0.86
Chd3B1AR17 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.42■□□□□ 0.86
Chd3B1AR17 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.42■□□□□ 0.86
Chd3B1AR17 Gm45417-201ENSMUST00000209533 758 ntBASIC20.42■□□□□ 0.86
Chd3B1AR17 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Chd3B1AR17 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd3B1AR17 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd3B1AR17 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.41■□□□□ 0.86
Chd3B1AR17 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd3B1AR17 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.41■□□□□ 0.86
Chd3B1AR17 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd3B1AR17 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd3B1AR17 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms