Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv16A0A0B4J1H3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv16A0A0B4J1H3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv16A0A0B4J1H3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trbv16A0A0B4J1H3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Gm14523-201ENSMUST00000117260 558 ntBASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv16A0A0B4J1H3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv16A0A0B4J1H3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv16A0A0B4J1H3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv16A0A0B4J1H3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv16A0A0B4J1H3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv16A0A0B4J1H3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv16A0A0B4J1H3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trbv16A0A0B4J1H3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv16A0A0B4J1H3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv16A0A0B4J1H3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.98□□□□□ -0.01
Trbv16A0A0B4J1H3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Gm7332-201ENSMUST00000118351 454 ntBASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv16A0A0B4J1H3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv16A0A0B4J1H3 Gm27502-201ENSMUST00000183495 199 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms