Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv3-3A0A0A6YWL2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv3-3A0A0A6YWL2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Notumos-201ENSMUST00000151998 2659 ntBASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gm10420-201ENSMUST00000121713 882 ntBASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ighv3-3A0A0A6YWL2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms