Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trav1A0A075B5Z4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav1A0A075B5Z4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav1A0A075B5Z4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav1A0A075B5Z4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav1A0A075B5Z4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav1A0A075B5Z4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav1A0A075B5Z4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav1A0A075B5Z4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trav1A0A075B5Z4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav1A0A075B5Z4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav1A0A075B5Z4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav1A0A075B5Z4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav1A0A075B5Z4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav1A0A075B5Z4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav1A0A075B5Z4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav1A0A075B5Z4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav1A0A075B5Z4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav1A0A075B5Z4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav1A0A075B5Z4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav1A0A075B5Z4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trav1A0A075B5Z4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms