Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PdfS4R2K0 Rgr-203ENSMUST00000225070 4704 ntBASIC9.41□□□□□ -0.9
PdfS4R2K0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gm15824-201ENSMUST00000119516 955 ntBASIC9.41□□□□□ -0.9
PdfS4R2K0 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.41□□□□□ -0.9
PdfS4R2K0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.41□□□□□ -0.9
PdfS4R2K0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.41□□□□□ -0.9
PdfS4R2K0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.41□□□□□ -0.9
PdfS4R2K0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.41□□□□□ -0.9
PdfS4R2K0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PdfS4R2K0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
PdfS4R2K0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.4□□□□□ -0.9
PdfS4R2K0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Gm27486-201ENSMUST00000184923 80 ntBASIC9.4□□□□□ -0.9
PdfS4R2K0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.4□□□□□ -0.9
PdfS4R2K0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PdfS4R2K0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
PdfS4R2K0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PdfS4R2K0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
PdfS4R2K0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms