Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gm7783-201ENSMUST00000204795 781 ntBASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gm45865-201ENSMUST00000211815 945 ntBASIC10.91□□□□□ -0.66
Nubp2Q9R061 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.91□□□□□ -0.66
Nubp2Q9R061 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nubp2Q9R061 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm23363-201ENSMUST00000175024 79 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm38341-201ENSMUST00000195357 515 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm5904-201ENSMUST00000210286 865 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nubp2Q9R061 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.9□□□□□ -0.66
Nubp2Q9R061 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nubp2Q9R061 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms