Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gm26461-201ENSMUST00000175064 290 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gm27046-201ENSMUST00000182160 463 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gm44405-201ENSMUST00000198952 126 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gm5950-201ENSMUST00000213337 772 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gm45925-201ENSMUST00000218882 744 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdc40Q9DC48 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdc40Q9DC48 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm15547-201ENSMUST00000122152 333 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm15276-201ENSMUST00000145953 498 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Mir5132-201ENSMUST00000175166 71 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm44967-201ENSMUST00000207047 631 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Pck2-205ENSMUST00000226352 2784 ntBASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdc40Q9DC48 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Gm24231-201ENSMUST00000104315 133 ntBASIC11.38□□□□□ -0.59
Cdc40Q9DC48 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdc40Q9DC48 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms