Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim13Q9CYB0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm24231-201ENSMUST00000104315 133 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm14928-201ENSMUST00000120198 477 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim13Q9CYB0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.3□□□□□ -0.6
Trim13Q9CYB0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm17208-201ENSMUST00000168388 535 ntBASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms