Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim8Q99PJ2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm15824-201ENSMUST00000119516 955 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm6244-201ENSMUST00000178732 841 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm27331-201ENSMUST00000183705 60 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim8Q99PJ2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm4984-201ENSMUST00000115987 360 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm11964-201ENSMUST00000120982 444 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm11597-201ENSMUST00000121423 964 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm22331-201ENSMUST00000158066 136 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm17150-201ENSMUST00000165577 381 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm24196-201ENSMUST00000179161 110 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm27839-201ENSMUST00000184242 106 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm42599-201ENSMUST00000201308 469 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm2824-203ENSMUST00000226189 1228 ntBASIC12□□□□□ -0.49
Trim8Q99PJ2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim8Q99PJ2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim8Q99PJ2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms