Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm24255-201ENSMUST00000104481 128 ntBASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm30285-201ENSMUST00000214614 422 ntBASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm9257-201ENSMUST00000221254 232 ntBASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga4Q91XY4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms