Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm2383-201ENSMUST00000181461 807 ntBASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.53□□□□□ -0.4
CopaQ8CIE6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CopaQ8CIE6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CopaQ8CIE6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.52□□□□□ -0.4
CopaQ8CIE6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.52□□□□□ -0.4
CopaQ8CIE6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.52□□□□□ -0.4
CopaQ8CIE6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CopaQ8CIE6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm24830-201ENSMUST00000102024 166 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm25890-201ENSMUST00000177643 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm22614-201ENSMUST00000178300 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm22042-201ENSMUST00000082989 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm26232-201ENSMUST00000083360 166 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm24136-201ENSMUST00000083374 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gm26110-201ENSMUST00000083971 165 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.52□□□□□ -0.41
CopaQ8CIE6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CopaQ8CIE6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Gm12997-201ENSMUST00000120207 640 ntBASIC12.51□□□□□ -0.41
CopaQ8CIE6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.51□□□□□ -0.41
CopaQ8CIE6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.51□□□□□ -0.41
CopaQ8CIE6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CopaQ8CIE6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms