Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm44882-201ENSMUST00000205702 802 ntBASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm24136-201ENSMUST00000083374 165 ntBASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc28bQ8CEG5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm26185-201ENSMUST00000157692 266 ntBASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm37917-201ENSMUST00000194711 392 ntBASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm37922-201ENSMUST00000195596 455 ntBASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm8463-201ENSMUST00000208573 613 ntBASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc28bQ8CEG5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.08□□□□□ -0.47
Ccdc28bQ8CEG5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc28bQ8CEG5 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.08□□□□□ -0.47
Ccdc28bQ8CEG5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms