Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Gm37424-201ENSMUST00000191727 561 ntBASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrif1Q8CDD9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm8062-201ENSMUST00000139696 444 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm10478-201ENSMUST00000084451 396 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lrif1Q8CDD9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm15703-201ENSMUST00000120250 880 ntBASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.09□□□□□ -0.47
Lrif1Q8CDD9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms