Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm12241-201ENSMUST00000118330 726 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm27516-201ENSMUST00000184237 98 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm18711-201ENSMUST00000199341 750 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm8712-201ENSMUST00000221090 701 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trub1Q8C0D0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm11222-201ENSMUST00000119005 738 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm2991-201ENSMUST00000173338 480 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm6334-201ENSMUST00000207083 228 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm9368-201ENSMUST00000219348 831 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trub1Q8C0D0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm14247-201ENSMUST00000120950 237 ntBASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.59□□□□□ -0.39
Trub1Q8C0D0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms