Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp54Q8BL06 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp54Q8BL06 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp54Q8BL06 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp54Q8BL06 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Gm43912-201ENSMUST00000204352 538 ntBASIC17.08■□□□□ 0.32
Usp54Q8BL06 Gm18463-201ENSMUST00000207258 474 ntBASIC17.08■□□□□ 0.32
Usp54Q8BL06 Gm18460-201ENSMUST00000208088 464 ntBASIC17.08■□□□□ 0.32
Usp54Q8BL06 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp54Q8BL06 AC164437.3-201ENSMUST00000228323 347 ntBASIC17.08■□□□□ 0.32
Usp54Q8BL06 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp54Q8BL06 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Gm13022-201ENSMUST00000121181 285 ntBASIC17.07■□□□□ 0.32
Usp54Q8BL06 Gm17192-201ENSMUST00000169031 511 ntBASIC17.07■□□□□ 0.32
Usp54Q8BL06 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC17.07■□□□□ 0.32
Usp54Q8BL06 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 CT010506.1-201ENSMUST00000223673 349 ntBASIC17.07■□□□□ 0.32
Usp54Q8BL06 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp54Q8BL06 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.07■□□□□ 0.32
Usp54Q8BL06 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp54Q8BL06 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm14807-201ENSMUST00000116640 983 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm11980-201ENSMUST00000121445 986 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm18294-201ENSMUST00000176980 1748 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 CT573047.1-201ENSMUST00000223652 851 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm5805-201ENSMUST00000072779 456 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm21759-201ENSMUST00000178345 1828 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm14395-201ENSMUST00000120494 563 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm8197-202ENSMUST00000193422 934 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Ighv1-60-201ENSMUST00000195816 405 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm10263-201ENSMUST00000085163 300 ntBASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp54Q8BL06 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms