Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm14126-201ENSMUST00000122345 395 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm7584-201ENSMUST00000175829 940 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm28882-201ENSMUST00000185504 314 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm7783-201ENSMUST00000204795 781 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm21769-201ENSMUST00000211922 111 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm13350-201ENSMUST00000120519 479 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm9630-201ENSMUST00000178304 885 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm9723-201ENSMUST00000192100 457 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm24136-201ENSMUST00000083374 165 ntBASIC12.12□□□□□ -0.47
Ubp1Q811S7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubp1Q811S7 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms