Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rtl1Q7M732 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl1Q7M732 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl1Q7M732 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl1Q7M732 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl1Q7M732 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rtl1Q7M732 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Rtl1Q7M732 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Rtl1Q7M732 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC21.52■■□□□ 1.03
Rtl1Q7M732 AC154849.4-201ENSMUST00000224868 365 ntBASIC21.52■■□□□ 1.03
Rtl1Q7M732 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rtl1Q7M732 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Rtl1Q7M732 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Gm8815-201ENSMUST00000173809 620 ntBASIC21.51■■□□□ 1.03
Rtl1Q7M732 Ighv1-48-201ENSMUST00000191795 294 ntBASIC21.51■■□□□ 1.03
Rtl1Q7M732 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl1Q7M732 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Gm12208-201ENSMUST00000122004 163 ntBASIC21.5■■□□□ 1.03
Rtl1Q7M732 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC21.5■■□□□ 1.03
Rtl1Q7M732 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Gm45428-201ENSMUST00000209619 1789 ntBASIC21.5■■□□□ 1.03
Rtl1Q7M732 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC21.5■■□□□ 1.03
Rtl1Q7M732 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl1Q7M732 Gm11246-201ENSMUST00000120880 345 ntBASIC21.49■■□□□ 1.03
Rtl1Q7M732 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Gm9550-201ENSMUST00000161130 862 ntBASIC21.49■■□□□ 1.03
Rtl1Q7M732 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Gm43242-201ENSMUST00000199507 1776 ntBASIC21.49■■□□□ 1.03
Rtl1Q7M732 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Gm15610-201ENSMUST00000120584 195 ntBASIC21.49■■□□□ 1.03
Rtl1Q7M732 Gm13910-201ENSMUST00000121752 1428 ntBASIC21.49■■□□□ 1.03
Rtl1Q7M732 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC21.49■■□□□ 1.03
Rtl1Q7M732 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtl1Q7M732 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Rtl1Q7M732 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms