Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm7150-201ENSMUST00000122032 981 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Mir1901-201ENSMUST00000122616 78 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm4654-201ENSMUST00000183305 982 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nup98Q6PFD9 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm23272-201ENSMUST00000104053 129 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm8459-201ENSMUST00000162504 760 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm37299-201ENSMUST00000193951 826 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Mir6958-201ENSMUST00000184207 73 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm28388-201ENSMUST00000186262 437 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm34023-201ENSMUST00000195539 217 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm2875-201ENSMUST00000211333 360 ntBASIC14.18□□□□□ -0.14
Nup98Q6PFD9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup98Q6PFD9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Gm8492-201ENSMUST00000182375 987 ntBASIC14.17□□□□□ -0.14
Nup98Q6PFD9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Gm8342-201ENSMUST00000209839 757 ntBASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.17□□□□□ -0.14
Nup98Q6PFD9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms