Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.28□□□□□ -0.6
AtmQ62388 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.28□□□□□ -0.6
AtmQ62388 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.28□□□□□ -0.6
AtmQ62388 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.28□□□□□ -0.6
AtmQ62388 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.28□□□□□ -0.6
AtmQ62388 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.28□□□□□ -0.6
AtmQ62388 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.28□□□□□ -0.6
AtmQ62388 Gm23604-201ENSMUST00000104311 132 ntBASIC11.28□□□□□ -0.6
AtmQ62388 Gm11660-201ENSMUST00000120955 412 ntBASIC11.28□□□□□ -0.6
AtmQ62388 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.28□□□□□ -0.6
AtmQ62388 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.28□□□□□ -0.6
AtmQ62388 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Gm8574-201ENSMUST00000203207 924 ntBASIC11.28□□□□□ -0.6
AtmQ62388 Gm45094-201ENSMUST00000207013 617 ntBASIC11.28□□□□□ -0.6
AtmQ62388 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
AtmQ62388 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
AtmQ62388 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
AtmQ62388 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
AtmQ62388 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AtmQ62388 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.27□□□□□ -0.6
AtmQ62388 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
AtmQ62388 Gm13117-201ENSMUST00000120894 691 ntBASIC11.27□□□□□ -0.6
AtmQ62388 Gm14760-201ENSMUST00000121831 999 ntBASIC11.27□□□□□ -0.6
AtmQ62388 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.27□□□□□ -0.6
AtmQ62388 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Gm9204-201ENSMUST00000212641 947 ntBASIC11.27□□□□□ -0.6
AtmQ62388 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
AtmQ62388 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.27□□□□□ -0.6
AtmQ62388 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.27□□□□□ -0.6
AtmQ62388 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
AtmQ62388 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
AtmQ62388 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
AtmQ62388 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
AtmQ62388 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Mir1905-201ENSMUST00000122779 82 ntBASIC11.27□□□□□ -0.61
AtmQ62388 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.27□□□□□ -0.61
AtmQ62388 Gm25554-201ENSMUST00000158075 113 ntBASIC11.27□□□□□ -0.61
AtmQ62388 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.27□□□□□ -0.61
AtmQ62388 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.27□□□□□ -0.61
AtmQ62388 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Gm45085-201ENSMUST00000209100 441 ntBASIC11.27□□□□□ -0.61
AtmQ62388 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
AtmQ62388 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.27□□□□□ -0.61
AtmQ62388 Gm14807-201ENSMUST00000116640 983 ntBASIC11.27□□□□□ -0.61
AtmQ62388 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.27□□□□□ -0.61
AtmQ62388 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.27□□□□□ -0.61
AtmQ62388 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Gm5706-201ENSMUST00000181525 993 ntBASIC11.27□□□□□ -0.61
AtmQ62388 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.27□□□□□ -0.61
AtmQ62388 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.27□□□□□ -0.61
AtmQ62388 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
AtmQ62388 Gm5449-201ENSMUST00000081132 357 ntBASIC11.27□□□□□ -0.61
AtmQ62388 Gm10263-201ENSMUST00000085163 300 ntBASIC11.27□□□□□ -0.61
AtmQ62388 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
AtmQ62388 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
AtmQ62388 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
AtmQ62388 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
AtmQ62388 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.26□□□□□ -0.61
AtmQ62388 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AtmQ62388 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AtmQ62388 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
AtmQ62388 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AtmQ62388 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.26□□□□□ -0.61
AtmQ62388 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.26□□□□□ -0.61
AtmQ62388 Gm8459-201ENSMUST00000162504 760 ntBASIC11.26□□□□□ -0.61
AtmQ62388 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.26□□□□□ -0.61
AtmQ62388 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AtmQ62388 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms