Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Foxc1Q61572 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm13369-201ENSMUST00000119442 987 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.31□□□□□ -0.92
Foxc1Q61572 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm28693-202ENSMUST00000190758 331 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm28926-201ENSMUST00000191063 680 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm38283-201ENSMUST00000193041 695 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm38297-201ENSMUST00000195122 1057 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm43491-201ENSMUST00000197133 784 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 AC159297.2-201ENSMUST00000219567 1075 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 AC158142.3-201ENSMUST00000226230 675 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Gm37795-201ENSMUST00000194216 2459 ntBASIC9.31□□□□□ -0.92
Foxc1Q61572 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Foxc1Q61572 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Foxc1Q61572 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.3□□□□□ -0.92
Foxc1Q61572 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Foxc1Q61572 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC9.3□□□□□ -0.92
Foxc1Q61572 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms