Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm7584-201ENSMUST00000175829 940 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm26956-201ENSMUST00000182176 986 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.95□□□□□ -0.5
Vsx2Q61412 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx2Q61412 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx2Q61412 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.94□□□□□ -0.5
Vsx2Q61412 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm12058-201ENSMUST00000118614 437 ntBASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm37201-201ENSMUST00000191845 523 ntBASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm30285-201ENSMUST00000214614 422 ntBASIC11.94□□□□□ -0.5
Vsx2Q61412 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.94□□□□□ -0.5
Vsx2Q61412 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Vsx2Q61412 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx2Q61412 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.94□□□□□ -0.5
Vsx2Q61412 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vsx2Q61412 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm11531-201ENSMUST00000117614 555 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm11222-201ENSMUST00000119005 738 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.93□□□□□ -0.5
Vsx2Q61412 Gm14381-201ENSMUST00000122105 414 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms