Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Urb1Q571H0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Urb1Q571H0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.28□□□□□ -0.6
Urb1Q571H0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm4482-201ENSMUST00000200876 742 ntBASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm45120-201ENSMUST00000208880 408 ntBASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm45398-201ENSMUST00000210561 165 ntBASIC11.28□□□□□ -0.6
Urb1Q571H0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.28□□□□□ -0.6
Urb1Q571H0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.28□□□□□ -0.6
Urb1Q571H0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Urb1Q571H0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Urb1Q571H0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Urb1Q571H0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.27□□□□□ -0.6
Urb1Q571H0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Urb1Q571H0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Urb1Q571H0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Urb1Q571H0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.27□□□□□ -0.6
Urb1Q571H0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Urb1Q571H0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Urb1Q571H0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Urb1Q571H0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.27□□□□□ -0.61
Urb1Q571H0 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.27□□□□□ -0.61
Urb1Q571H0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Gm28388-201ENSMUST00000186262 437 ntBASIC11.27□□□□□ -0.61
Urb1Q571H0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.27□□□□□ -0.61
Urb1Q571H0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.27□□□□□ -0.61
Urb1Q571H0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Urb1Q571H0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.27□□□□□ -0.61
Urb1Q571H0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Urb1Q571H0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Urb1Q571H0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.27□□□□□ -0.61
Urb1Q571H0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Urb1Q571H0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Urb1Q571H0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Urb1Q571H0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Urb1Q571H0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Urb1Q571H0 Gm11989-201ENSMUST00000117240 672 ntBASIC11.26□□□□□ -0.61
Urb1Q571H0 Gm11362-201ENSMUST00000118838 850 ntBASIC11.26□□□□□ -0.61
Urb1Q571H0 Gm28324-201ENSMUST00000187913 264 ntBASIC11.26□□□□□ -0.61
Urb1Q571H0 Gm5733-201ENSMUST00000190232 939 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms