Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Gm8018-201ENSMUST00000173536 789 ntBASIC12.1□□□□□ -0.47
Scn2bQ56A07 Gm18584-201ENSMUST00000203098 964 ntBASIC12.1□□□□□ -0.47
Scn2bQ56A07 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.1□□□□□ -0.47
Scn2bQ56A07 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Scn2bQ56A07 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm13392-201ENSMUST00000117708 150 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Mir1938-201ENSMUST00000158746 100 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm6222-202ENSMUST00000182143 629 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm43630-201ENSMUST00000201550 776 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.09□□□□□ -0.47
Scn2bQ56A07 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn2bQ56A07 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scn2bQ56A07 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scn2bQ56A07 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Scn2bQ56A07 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Scn2bQ56A07 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.08□□□□□ -0.48
Scn2bQ56A07 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Gm11591-201ENSMUST00000120063 702 ntBASIC12.08□□□□□ -0.48
Scn2bQ56A07 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Gm25261-201ENSMUST00000157416 134 ntBASIC12.08□□□□□ -0.48
Scn2bQ56A07 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Gm43438-201ENSMUST00000198133 379 ntBASIC12.08□□□□□ -0.48
Scn2bQ56A07 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn2bQ56A07 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms