Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Gm15823-201ENSMUST00000064305 670 ntBASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim40Q3UWA4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim40Q3UWA4 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Mir6977-201ENSMUST00000184960 64 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim40Q3UWA4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm12928-201ENSMUST00000117115 573 ntBASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm8099-201ENSMUST00000200510 742 ntBASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim40Q3UWA4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms