Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Gm26232-201ENSMUST00000083360 166 ntBASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Brf2Q3UAW9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Brf2Q3UAW9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.52□□□□□ -0.57
Brf2Q3UAW9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm37424-201ENSMUST00000191727 561 ntBASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Brf2Q3UAW9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm42627-201ENSMUST00000197347 224 ntBASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Gm25857-201ENSMUST00000082788 129 ntBASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Brf2Q3UAW9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms