Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm13015-201ENSMUST00000118674 204 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm14760-201ENSMUST00000121831 999 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm10766-202ENSMUST00000194123 606 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm16476-201ENSMUST00000221544 139 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccbe1Q3MI99 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gm9719-201ENSMUST00000162765 543 ntBASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Gm9271-201ENSMUST00000185988 2580 ntBASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccbe1Q3MI99 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccbe1Q3MI99 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms