Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.23□□□□□ -0.29
Col9a2Q07643 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm28686-201ENSMUST00000187404 609 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm4034-201ENSMUST00000187674 480 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.23□□□□□ -0.29
Col9a2Q07643 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Gm26448-201ENSMUST00000082446 203 ntBASIC13.23□□□□□ -0.29
Col9a2Q07643 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a2Q07643 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col9a2Q07643 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.22□□□□□ -0.29
Col9a2Q07643 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm8199-201ENSMUST00000121323 823 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.22□□□□□ -0.29
Col9a2Q07643 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Mir6546-201ENSMUST00000184460 62 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm43058-201ENSMUST00000197645 625 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm45770-201ENSMUST00000212105 616 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm21811-201ENSMUST00000096485 930 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.22□□□□□ -0.29
Col9a2Q07643 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a2Q07643 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col9a2Q07643 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.21□□□□□ -0.29
Col9a2Q07643 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.21□□□□□ -0.29
Col9a2Q07643 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.21□□□□□ -0.29
Col9a2Q07643 Gm9211-201ENSMUST00000182882 975 ntBASIC13.21□□□□□ -0.29
Col9a2Q07643 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.21□□□□□ -0.29
Col9a2Q07643 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Ntng1-201ENSMUST00000051253 327 ntBASIC13.21□□□□□ -0.29
Col9a2Q07643 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col9a2Q07643 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Col9a2Q07643 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col9a2Q07643 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms