Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cux2P70298 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cux2P70298 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cux2P70298 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cux2P70298 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cux2P70298 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cux2P70298 Gm2448-201ENSMUST00000207080 559 ntBASIC19.63■□□□□ 0.73
Cux2P70298 Gm9204-201ENSMUST00000212641 947 ntBASIC19.63■□□□□ 0.73
Cux2P70298 Gm5468-202ENSMUST00000227851 682 ntBASIC19.63■□□□□ 0.73
Cux2P70298 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 AC160405.1-201ENSMUST00000218207 1545 ntBASIC19.63■□□□□ 0.73
Cux2P70298 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cux2P70298 Gm42863-201ENSMUST00000197875 2958 ntBASIC19.63■□□□□ 0.73
Cux2P70298 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Gm26976-201ENSMUST00000182929 908 ntBASIC19.62■□□□□ 0.73
Cux2P70298 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 AC162932.1-201ENSMUST00000219209 872 ntBASIC19.62■□□□□ 0.73
Cux2P70298 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC19.62■□□□□ 0.73
Cux2P70298 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cux2P70298 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cux2P70298 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC19.61■□□□□ 0.73
Cux2P70298 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Cux2P70298 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Gm37365-201ENSMUST00000193109 409 ntBASIC19.61■□□□□ 0.73
Cux2P70298 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC19.61■□□□□ 0.73
Cux2P70298 Gm7904-201ENSMUST00000217049 465 ntBASIC19.61■□□□□ 0.73
Cux2P70298 Gm4930-201ENSMUST00000219926 1087 ntBASIC19.61■□□□□ 0.73
Cux2P70298 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cux2P70298 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Cux2P70298 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Cux2P70298 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cux2P70298 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Cux2P70298 Gm2420-201ENSMUST00000119864 2149 ntBASIC19.61■□□□□ 0.73
Cux2P70298 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC19.61■□□□□ 0.73
Cux2P70298 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cux2P70298 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Gm4294-201ENSMUST00000105169 614 ntBASIC19.6■□□□□ 0.73
Cux2P70298 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
Cux2P70298 Gm13422-201ENSMUST00000118834 504 ntBASIC19.6■□□□□ 0.73
Cux2P70298 Mir432-201ENSMUST00000157230 75 ntBASIC19.6■□□□□ 0.73
Cux2P70298 Gm27956-201ENSMUST00000175604 260 ntBASIC19.6■□□□□ 0.73
Cux2P70298 Gm5267-201ENSMUST00000191574 1045 ntBASIC19.6■□□□□ 0.73
Cux2P70298 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Cux2P70298 Gm5385-201ENSMUST00000118988 1559 ntBASIC19.6■□□□□ 0.73
Cux2P70298 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cux2P70298 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cux2P70298 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms