Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gm14704-201ENSMUST00000120300 874 ntBASIC9□□□□□ -0.97
CirbpP60824 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9□□□□□ -0.97
CirbpP60824 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Mir6420-201ENSMUST00000185032 102 ntBASIC9□□□□□ -0.97
CirbpP60824 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9□□□□□ -0.97
CirbpP60824 Gm29396-201ENSMUST00000185659 716 ntBASIC9□□□□□ -0.97
CirbpP60824 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9□□□□□ -0.97
CirbpP60824 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9□□□□□ -0.97
CirbpP60824 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Gm8227-201ENSMUST00000223306 571 ntBASIC9□□□□□ -0.97
CirbpP60824 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9□□□□□ -0.97
CirbpP60824 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9□□□□□ -0.97
CirbpP60824 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gm15897-201ENSMUST00000117770 1486 ntBASIC9□□□□□ -0.97
CirbpP60824 Gm44775-201ENSMUST00000207266 1456 ntBASIC9□□□□□ -0.97
CirbpP60824 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gm44401-201ENSMUST00000204462 2375 ntBASIC9□□□□□ -0.97
CirbpP60824 Rab3c-202ENSMUST00000223922 2398 ntBASIC9□□□□□ -0.97
CirbpP60824 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
CirbpP60824 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CirbpP60824 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Gm43045-201ENSMUST00000198725 2095 ntBASIC9□□□□□ -0.97
CirbpP60824 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CirbpP60824 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
CirbpP60824 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Rgr-203ENSMUST00000225070 4704 ntBASIC8.99□□□□□ -0.97
CirbpP60824 AC123834.1-201ENSMUST00000225346 2043 ntBASIC8.99□□□□□ -0.97
CirbpP60824 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CirbpP60824 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC8.99□□□□□ -0.97
CirbpP60824 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.99□□□□□ -0.97
CirbpP60824 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC8.99□□□□□ -0.97
CirbpP60824 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC8.99□□□□□ -0.97
CirbpP60824 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC8.99□□□□□ -0.97
CirbpP60824 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CirbpP60824 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CirbpP60824 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Gm38157-201ENSMUST00000194178 1698 ntBASIC8.99□□□□□ -0.97
CirbpP60824 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CirbpP60824 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CirbpP60824 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CirbpP60824 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms