Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Abcd3P55096 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Abcd3P55096 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Abcd3P55096 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Abcd3P55096 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.96□□□□□ -0.65
Abcd3P55096 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Abcd3P55096 Gm43118-201ENSMUST00000199149 775 ntBASIC10.96□□□□□ -0.65
Abcd3P55096 Gm35960-201ENSMUST00000202712 767 ntBASIC10.96□□□□□ -0.65
Abcd3P55096 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.96□□□□□ -0.65
Abcd3P55096 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Abcd3P55096 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Abcd3P55096 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Abcd3P55096 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Abcd3P55096 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Abcd3P55096 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Abcd3P55096 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Abcd3P55096 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Abcd3P55096 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Abcd3P55096 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Abcd3P55096 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Abcd3P55096 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Abcd3P55096 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Gm4986-201ENSMUST00000119731 549 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Gm14832-201ENSMUST00000121289 322 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.95□□□□□ -0.66
Abcd3P55096 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.95□□□□□ -0.66
Abcd3P55096 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Gm42693-201ENSMUST00000196779 631 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Gm45331-201ENSMUST00000209868 554 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.95□□□□□ -0.66
Abcd3P55096 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Gm9823-201ENSMUST00000051212 327 ntBASIC10.95□□□□□ -0.66
Abcd3P55096 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Abcd3P55096 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Abcd3P55096 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Abcd3P55096 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms