Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Shmt1P50431 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shmt1P50431 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Shmt1P50431 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Gm12164-201ENSMUST00000121695 551 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Gm4034-201ENSMUST00000187674 480 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.93□□□□□ -0.34
Shmt1P50431 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shmt1P50431 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.93□□□□□ -0.34
Shmt1P50431 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.93□□□□□ -0.34
Shmt1P50431 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shmt1P50431 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Shmt1P50431 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Shmt1P50431 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.92□□□□□ -0.34
Shmt1P50431 Gm4909-201ENSMUST00000118749 794 ntBASIC12.92□□□□□ -0.34
Shmt1P50431 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.92□□□□□ -0.34
Shmt1P50431 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Gm8385-201ENSMUST00000058999 643 ntBASIC12.92□□□□□ -0.34
Shmt1P50431 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Shmt1P50431 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shmt1P50431 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.91□□□□□ -0.34
Shmt1P50431 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms