Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.44□□□□□ -0.42
Vps4bP46467 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.43□□□□□ -0.42
Vps4bP46467 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Gm13736-201ENSMUST00000119272 253 ntBASIC12.43□□□□□ -0.42
Vps4bP46467 Gm16570-201ENSMUST00000161951 436 ntBASIC12.43□□□□□ -0.42
Vps4bP46467 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.43□□□□□ -0.42
Vps4bP46467 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vps4bP46467 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps4bP46467 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps4bP46467 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps4bP46467 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Map1b-203ENSMUST00000223725 2669 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Gm5187-201ENSMUST00000117317 991 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Gm13342-201ENSMUST00000121055 207 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps4bP46467 Gm7809-201ENSMUST00000153199 742 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Gm27023-201ENSMUST00000182372 285 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Gm3890-201ENSMUST00000182416 207 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Gm3961-201ENSMUST00000204425 994 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps4bP46467 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps4bP46467 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Snora73a-201ENSMUST00000082453 205 ntBASIC12.42□□□□□ -0.42
Vps4bP46467 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps4bP46467 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps4bP46467 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps4bP46467 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps4bP46467 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.41□□□□□ -0.42
Vps4bP46467 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Vps4bP46467 Gm24548-201ENSMUST00000158650 108 ntBASIC12.41□□□□□ -0.42
Vps4bP46467 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.41□□□□□ -0.42
Vps4bP46467 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Vps4bP46467 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps4bP46467 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vps4bP46467 Gm38266-201ENSMUST00000194931 421 ntBASIC12.41□□□□□ -0.42
Vps4bP46467 Gm43822-201ENSMUST00000200285 476 ntBASIC12.41□□□□□ -0.42
Vps4bP46467 Gm45880-201ENSMUST00000213041 853 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms