Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Cdx2P43241 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.61□□□□□ -0.55
Cdx2P43241 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.61□□□□□ -0.55
Cdx2P43241 Gm22138-201ENSMUST00000158748 128 ntBASIC11.61□□□□□ -0.55
Cdx2P43241 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdx2P43241 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.61□□□□□ -0.55
Cdx2P43241 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.61□□□□□ -0.55
Cdx2P43241 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.61□□□□□ -0.55
Cdx2P43241 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdx2P43241 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdx2P43241 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdx2P43241 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm15352-201ENSMUST00000118696 270 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdx2P43241 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Cdx2P43241 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm8492-201ENSMUST00000182375 987 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Cdx2P43241 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdx2P43241 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdx2P43241 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.6□□□□□ -0.55
Cdx2P43241 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.59□□□□□ -0.55
Cdx2P43241 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdx2P43241 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Gm11949-201ENSMUST00000117640 372 ntBASIC11.59□□□□□ -0.55
Cdx2P43241 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.59□□□□□ -0.55
Cdx2P43241 Gm12516-201ENSMUST00000120819 385 ntBASIC11.59□□□□□ -0.55
Cdx2P43241 Mir1901-201ENSMUST00000122616 78 ntBASIC11.59□□□□□ -0.55
Cdx2P43241 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Gm6485-201ENSMUST00000160676 439 ntBASIC11.59□□□□□ -0.55
Cdx2P43241 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdx2P43241 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Gm37299-201ENSMUST00000193951 826 ntBASIC11.59□□□□□ -0.55
Cdx2P43241 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdx2P43241 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms