Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Gm13035-201ENSMUST00000117496 342 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Gm9062-201ENSMUST00000117712 727 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Gm13611-201ENSMUST00000118269 318 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Gm12501-201ENSMUST00000119163 529 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.84□□□□□ -0.35
Gdf6P43028 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.84□□□□□ -0.35
Gdf6P43028 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.84□□□□□ -0.35
Gdf6P43028 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.84□□□□□ -0.35
Gdf6P43028 Gm43947-201ENSMUST00000203019 959 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.84□□□□□ -0.35
Gdf6P43028 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.84□□□□□ -0.35
Gdf6P43028 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.84□□□□□ -0.35
Gdf6P43028 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gdf6P43028 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gdf6P43028 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.84□□□□□ -0.35
Gdf6P43028 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.84□□□□□ -0.35
Gdf6P43028 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gdf6P43028 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gdf6P43028 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Gdf6P43028 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Gdf6P43028 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gdf6P43028 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gdf6P43028 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gdf6P43028 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Gdf6P43028 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.83□□□□□ -0.35
Gdf6P43028 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gdf6P43028 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.83□□□□□ -0.36
Gdf6P43028 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.83□□□□□ -0.36
Gdf6P43028 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.83□□□□□ -0.36
Gdf6P43028 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 Gm8959-201ENSMUST00000213150 571 ntBASIC12.83□□□□□ -0.36
Gdf6P43028 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.83□□□□□ -0.36
Gdf6P43028 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gdf6P43028 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gdf6P43028 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.83□□□□□ -0.36
Gdf6P43028 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gdf6P43028 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.82□□□□□ -0.36
Gdf6P43028 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gdf6P43028 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gdf6P43028 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gdf6P43028 Gm5419-201ENSMUST00000119301 527 ntBASIC12.82□□□□□ -0.36
Gdf6P43028 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.82□□□□□ -0.36
Gdf6P43028 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.82□□□□□ -0.36
Gdf6P43028 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.82□□□□□ -0.36
Gdf6P43028 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.82□□□□□ -0.36
Gdf6P43028 Gm8343-201ENSMUST00000182705 994 ntBASIC12.82□□□□□ -0.36
Gdf6P43028 Gm5733-201ENSMUST00000190232 939 ntBASIC12.82□□□□□ -0.36
Gdf6P43028 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms