Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.23□□□□□ -1.09
Rpl28P41105 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm9002-201ENSMUST00000178437 499 ntBASIC8.23□□□□□ -1.09
Rpl28P41105 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm6473-201ENSMUST00000188572 1210 ntBASIC8.23□□□□□ -1.09
Rpl28P41105 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.23□□□□□ -1.09
Rpl28P41105 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.23□□□□□ -1.09
Rpl28P41105 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC8.23□□□□□ -1.09
Rpl28P41105 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Arhgef33-209ENSMUST00000225223 714 ntBASIC8.23□□□□□ -1.09
Rpl28P41105 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Rpl28P41105 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm6180-201ENSMUST00000065243 498 ntBASIC8.23□□□□□ -1.09
Rpl28P41105 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.23□□□□□ -1.09
Rpl28P41105 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Rpl28P41105 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC8.23□□□□□ -1.09
Rpl28P41105 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Rpl28P41105 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Rpl28P41105 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm43267-201ENSMUST00000199664 1796 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
Rpl28P41105 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Rpl28P41105 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Mir686-201ENSMUST00000102174 109 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm14350-201ENSMUST00000116642 640 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Gm11618-201ENSMUST00000117946 267 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Gm14928-201ENSMUST00000120198 477 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Gm12539-201ENSMUST00000121549 1098 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl28P41105 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm2495-201ENSMUST00000191160 466 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC8.22□□□□□ -1.09
Rpl28P41105 Gm9908-201ENSMUST00000211534 448 ntBASIC8.22□□□□□ -1.09
Rpl28P41105 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms