Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm16166-201ENSMUST00000118291 787 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm24844-201ENSMUST00000158679 127 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm18367-201ENSMUST00000176139 600 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm26134-201ENSMUST00000178484 110 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Mir6407-201ENSMUST00000184510 101 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm2553-201ENSMUST00000215986 605 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cxcl12P40224 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cxcl12P40224 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcl12P40224 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.56□□□□□ -0.4
Cxcl12P40224 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cxcl12P40224 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.55□□□□□ -0.4
Cxcl12P40224 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Gm25766-201ENSMUST00000104101 131 ntBASIC12.55□□□□□ -0.4
Cxcl12P40224 Gm15004-201ENSMUST00000119192 630 ntBASIC12.55□□□□□ -0.4
Cxcl12P40224 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.55□□□□□ -0.4
Cxcl12P40224 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.55□□□□□ -0.4
Cxcl12P40224 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl12P40224 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcl12P40224 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm24791-201ENSMUST00000104284 131 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm12943-201ENSMUST00000119616 210 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm12036-201ENSMUST00000120008 530 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms