Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.2□□□□□ -0.46
LdlrP35951 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LdlrP35951 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
LdlrP35951 Gm13369-201ENSMUST00000119442 987 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.19□□□□□ -0.46
LdlrP35951 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Gm16379-201ENSMUST00000161469 348 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Gm7029-201ENSMUST00000173226 450 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm8762-201ENSMUST00000193486 339 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm38092-201ENSMUST00000195600 653 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm6334-201ENSMUST00000207083 228 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.19□□□□□ -0.46
LdlrP35951 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.19□□□□□ -0.46
LdlrP35951 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
LdlrP35951 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LdlrP35951 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LdlrP35951 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LdlrP35951 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LdlrP35951 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
LdlrP35951 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.18□□□□□ -0.46
LdlrP35951 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.18□□□□□ -0.46
LdlrP35951 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.18□□□□□ -0.46
LdlrP35951 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LdlrP35951 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LdlrP35951 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LdlrP35951 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.18□□□□□ -0.46
LdlrP35951 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LdlrP35951 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms