Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Srp54P14576 Gm4909-201ENSMUST00000118749 794 ntBASIC12.08□□□□□ -0.48
Srp54P14576 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Gm9230-201ENSMUST00000188228 532 ntBASIC12.08□□□□□ -0.48
Srp54P14576 Gm18753-201ENSMUST00000201000 566 ntBASIC12.08□□□□□ -0.48
Srp54P14576 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.08□□□□□ -0.48
Srp54P14576 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.08□□□□□ -0.48
Srp54P14576 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Gm9996-201ENSMUST00000070359 913 ntBASIC12.08□□□□□ -0.48
Srp54P14576 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Srp54P14576 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Srp54P14576 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.08□□□□□ -0.48
Srp54P14576 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Srp54P14576 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54P14576 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.08□□□□□ -0.48
Srp54P14576 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.07□□□□□ -0.48
Srp54P14576 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Gm7857-201ENSMUST00000117957 358 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Gm12217-201ENSMUST00000118858 696 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Gm9083-201ENSMUST00000120423 819 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.07□□□□□ -0.48
Srp54P14576 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Mir6927-201ENSMUST00000184494 71 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Gm17812-201ENSMUST00000204935 318 ntBASIC12.07□□□□□ -0.48
Srp54P14576 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54P14576 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.07□□□□□ -0.48
Srp54P14576 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54P14576 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54P14576 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54P14576 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54P14576 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54P14576 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Srp54P14576 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms