Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Gm5866-201ENSMUST00000177881 973 ntBASIC10.12□□□□□ -0.79
Cxcl1P12850 Gm8515-201ENSMUST00000194852 576 ntBASIC10.12□□□□□ -0.79
Cxcl1P12850 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.12□□□□□ -0.79
Cxcl1P12850 Gm45384-201ENSMUST00000210451 277 ntBASIC10.12□□□□□ -0.79
Cxcl1P12850 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.12□□□□□ -0.79
Cxcl1P12850 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Gm5356-201ENSMUST00000093326 615 ntBASIC10.12□□□□□ -0.79
Cxcl1P12850 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Cxcl1P12850 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Cxcl1P12850 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cxcl1P12850 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Cxcl1P12850 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
Cxcl1P12850 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.12□□□□□ -0.79
Cxcl1P12850 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cxcl1P12850 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm24830-201ENSMUST00000102024 166 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm11814-201ENSMUST00000119515 929 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm8652-201ENSMUST00000181363 964 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm45930-201ENSMUST00000221330 292 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm26232-201ENSMUST00000083360 166 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.11□□□□□ -0.79
Cxcl1P12850 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.11□□□□□ -0.79
Cxcl1P12850 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cxcl1P12850 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.1□□□□□ -0.79
Cxcl1P12850 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl1P12850 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl1P12850 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl1P12850 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl1P12850 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms